You must install libnetcdf (on debian):
sudo apt-get install libnetcdf-dev

next, symlink to the directory with wind and current data, or copy into the winddata and currentdata folders:
ln -s /media/sean/TOSHIBA\ EXT/Climatology-Data/Climate-Winds-6hr/ winddata
ln -s /media/sean/TOSHIBA\ EXT/Climatology-Data/Climate-Current-Yearly-gz/ currentdata

run the configure script:
./configure

and make:
